R: Gene dropping simulations - Frequencies

gen.simuSampleFreq {GENLIB} | R Documentation

## Gene dropping simulations - Frequencies

### Description

Returns the number of alleles transmitted to specified probands from ancestors

### Usage

    gen.simuSampleFreq( gen, pro, ancestors, stateAncestors, simulNo = "5000")

### Arguments

`gen` | An object of class GLgen obtained with gen.genealogy, gen.lineages or gen.branching. Required.
`pro` | Vector of proband id numbers to be included. Required.
`ancestors` | Vector of ancestors id numbers to be included. Required.
`stateAncestors` | Required vector indicating, for each ancestor in ancestors, the genotype state: 0 = no disease allele present 1 = 1 disease allele present 2 = 2 disease alleles present
`simulNo` | Number of simulations to perform. Default is 5000.

### Value

A data frame containing for each row (one row per proband): Alleles.transmitted.0 Alleles.transmitted.1 Alleles.transmitted.2

### See Also

`gen.genealogy` `gen.simuProb` `gen.simuSet` `gen.simuSample`

### Examples

    data(geneaJi)
    genJi<-gen.genealogy(geneaJi)
    gen.simuSampleFreq(genJi, pro=c(1,29), ancestors=c(20,25),stateAncestors=c(2,1), simulNo = 1000)

[Package GENLIB version 1.0.8 Index]