R: creates an snp.data object

snp.data {GenABEL} | R Documentation

## creates an snp.data object

### Description

Creates object of class `snp.data-class`

### Usage

    snp.data(nids, rawdata, idnames = as.character(c(1:nids)),
    	snpnames = as.character(c(1:(length(rawdata)/ceiling(nids/4)))),
    	chromosome = as.factor(rep(1,(length(rawdata)/ceiling(nids/4)))),
    	map = as.double(seq(1,(length(rawdata)/ceiling(nids/4)))),
    	coding=as.raw(rep(1,length(rawdata)/ceiling(nids/4))),
    	strand=as.raw(rep(0,length(rawdata)/ceiling(nids/4))),
    	male = rep(0, nids))

### Arguments

`nids` | number of people
`idnames` | list of IDs
`male` | male indicator for IDs
`snpnames` | list of SNP names
`chromosome` | list of chromosomes SNPs belong to
`coding` | list of nucleotide coding for the SNPs
`strand` | strands of the SNPs
`map` | map position of SNPs
`rawdata` | genotypes presented in raw data format

### Value

Object of class `snp.data-class`

### Author(s)

Yurii Aulchenko

### See Also

`snp.data-class`

[Package GenABEL version 1.8-0 Index]