R: show HWE tables

HWE.show {GenABEL} | R Documentation

## show HWE tables

### Description

This function displays HWE tables and shows Chi2 and exact HWE P-values

### Usage

    HWE.show(data, idsubset = c(1:data@gtdata@nids),
    	snpsubset = c(1:data@gtdata@nsnps))

### Arguments

`data` | object of class `gwaa.data-class` or `snp.data-class`
`snpsubset` | Index, character or logical vector with subset of SNPs to run analysis on. If missing, all SNPs from `data` are used for analysis.
`idsubset` | Index, character or logical vector with subset of IDs to run analysis on. If missing, all people from `data/cc` are used for analysis.

### Value

Only screen output

### Author(s)

Yurii Aulchenko

### See Also

`check.marker`

### Examples

    require(GenABEL.data)
    data(srdta)
    mc <- check.marker(srdta,p.lev=0.01,ibs.mrk=0)
    mc$nohwe
    HWE.show(data=srdta,snps=mc$nohwe)

[Package GenABEL version 1.8-0 Index]