impute2mach {GenABEL}R Documentation

converts IMPUTE to MACH files

Description

function to convert IMPUTE files to MACH format

Usage

  impute2mach(genofile, infofile, samplefile, machbasename,
    maketextdosefile = TRUE, ...)

Arguments

genofile

IMPUTE genotype file name

infofile

IMPUTE info file name

samplefile

IMPUTE sample file name

machbasename

base name for MACH-formatted outputs

maketextdosefile

whether a text dosefile is to be generated (if not, only filevector (*.fvi / *.fvd) files, usable with ProbABEL/DatABEL, will be generated). Default: TRUE

...

arguments passed to extract.annotation.impute (DO CHECK the documentation, otherwise your annotation may be skrewed up!)

Value

nothing returned except files generated on the disk

Author(s)

Yurii Aulchenko


[Package GenABEL version 1.8-0 Index]