R: A utility to generate SNPTEST sample file

snptest_sample {gap} | R Documentation

## A utility to generate SNPTEST sample file

### Description

A utility to generate SNPTEST sample file

### Usage

    snptest_sample(
      data,
      sample_file = "snptest.sample",
      ID_1 = "ID_1",
      ID_2 = "ID_2",
      missing = "missing",
      C = NULL,
      D = NULL,
      P = NULL
    )

### Arguments

`data` | Data to be used.
`sample_file` | Output filename.
`ID_1` | ID_1 as in the sample file.
`ID_2` | ID_2 as in the sample file.
`missing` | Missing data column.
`C` | Continuous variables.
`D` | Discrete variables.
`P` | Phenotypic variables.

### Value

Output file in SNPTEST's sample format.

### Examples

    ## Not run:
    d <- data.frame(ID_1=1,ID_2=1,missing=0,PC1=1,PC2=2,D1=1,P1=10)
    snptest_sample(d,C=paste0("PC",1:2),D=paste0("D",1:1),P=paste0("P",1:1))

    ## End(Not run)

[Package gap version 1.2.3-6 Index]