R: Dissimilarity-Based Functions for Ecological Analysis

# Dissimilarity-Based Functions for Ecological Analysis

## Documentation for package ‘ecodist’ version 2.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

ecodist-package | Dissimilarity-Based Functions for Ecological Analysis
addord | Fit new points to an existing NMDS configuration.
bcdist | Bray-Curtis distance
bump | Nine-bump spatial pattern
bump.pmgram | Nine-bump spatial pattern
cor2m | Two-matrix correlation table
corgen | Generate correlated data
crosstab | Data formatting
distance | Calculate dissimilarity/distance metrics
ecodist | Dissimilarity-Based Functions for Ecological Analysis
fixdmat | Distance matrix conversion
full | Full symmetric matrix
graze | Site information and grazed vegetation data.
iris.fit | Example of adding to an ordination
iris.nmds | Example for nmds
iris.vf | Example for vector fitting on ordination
iris.vfrot | Example for vector fitting on rotated ordination
lower | Lower-triangular matrix
mantel | Mantel test
mgram | Mantel correlogram
mgroup | Mantel test for groups
min.nmds | Find minimum stress configuration
MRM | Multiple Regression on distance Matrices
nmds | Non-metric multidimensional scaling
nmds.min | Find minimum stress configuration
pco | Principal coordinates analysis
plot.mgram | Plot a Mantel correlogram
plot.nmds | Plot information about NMDS ordination
plot.vf | Plots fitted vectors onto an ordination diagram
pmgram | Partial Mantel correlogram
residuals.mgram | Residuals of a Mantel correlogram
vf | Vector fitting
xdistance | Cross-distance between two datasets.
xmantel | Cross-Mantel test
xmgram | Cross-Mantel correlogram
z.no | Example for pmgram
z.z1 | Example for pmgram