R: An example data set

modelData {dmt} | R Documentation

## An example data set

### Description

Preprocessed gene expression and gene copy number levels of 51 patients in chromosome 17 for 10 genes.

### Usage

    data(modelData)

### Format

X

  Gene expression levels in matrix form. Genes are in columns and samples in rows.

Y

  Gene copy number levels in matrix form. Genes are in columns and samples in rows.

### Source

Integrated gene copy number and expression microarray analysis of gastric cancer highlights potential target genes. Myllykangas et al., International Journal of Cancer, vol. 123, no. 4, pp. 817–25, 2008.

### Examples

    data(modelData)

    model <- fit.dependency.model(X, Y)
    model

[Package dmt version 0.8.20 Index]