R: Tries to run DendSer on a dendrogram

DendSer.dendrogram {dendextend} | R Documentation

## Tries to run DendSer on a dendrogram

### Description

Implements dendrogram seriation. The function tries to turn the dend into hclust, on which it runs DendSer.

Also, if a distance matrix is missing, it will try to use the cophenetic distance.

### Usage

    DendSer.dendrogram(dend, ser_weight, ...)

### Arguments

`dend` | An object of class dendrogram
`ser_weight` | Used by cost function to evaluate ordering. For cost=costLS, this is a vector of object weights. Otherwise is a dist or symmetric matrix. passed to DendSer. If it is missing, the cophenetic distance is used instead.
`...` | parameters passed to DendSer

### Value

Numeric vector giving an optimal dendrogram order

### See Also

`DendSer`, DendSer.dendrogram , untangle_DendSer, rotate_DendSer

### Examples

    ## Not run:
    library(DendSer) # already used from within the function
    hc <- hclust(dist(USArrests[1:4,]), "ave")
    dend <- as.dendrogram(hc)
    DendSer.dendrogram(dend)

    ## End(Not run)

[Package dendextend version 1.8.0 Index]