CRF-package             CRF - Conditional Random Fields
Chain                   Chain CRF example
Clique                  Clique CRF example
Loop                    Loop CRF example
Rain                    Rain data
Small                   Small CRF example
Tree                    Tree CRF example
clamp.crf               Make clamped CRF
clamp.reset             Reset clamped CRF
crf.nll                 Calculate CRF negative log likelihood
crf.update              Update CRF potentials
decode.block            Decoding method using block iterated
                        conditional modes algorithm
decode.chain            Decoding method for chain-structured graphs
decode.conditional      Conditional decoding method
decode.cutset           Decoding method for graphs with a small cutset
decode.exact            Decoding method for small graphs
decode.greedy           Decoding method using greedy algorithm
decode.icm              Decoding method using iterated conditional
                        modes algorithm
decode.ilp              Decoding method using integer linear
                        programming
decode.junction         Decoding method for low-treewidth graphs
decode.lbp              Decoding method using loopy belief propagation
decode.marginal         Decoding method using inference
decode.rbp              Decoding method using residual belief
                        propagation
decode.sample           Decoding method using sampling
decode.trbp             Decoding method using tree-reweighted belief
                        propagation
decode.tree             Decoding method for tree- and forest-structured
                        graphs
duplicate.crf           Duplicate CRF
get.logPotential        Calculate the log-potential of CRF
get.potential           Calculate the potential of CRF
infer.chain             Inference method for chain-structured graphs
infer.conditional       Conditional inference method
infer.cutset            Inference method for graphs with a small cutset
infer.exact             Inference method for small graphs
infer.junction          Inference method for low-treewidth graphs
infer.lbp               Inference method using loopy belief propagation
infer.rbp               Inference method using residual belief
                        propagation
infer.sample            Inference method using sampling
infer.trbp              Inference method using tree-reweighted belief
                        propagation
infer.tree              Inference method for tree- and
                        forest-structured graphs
make.crf                Make CRF
make.features           Make CRF features
make.par                Make CRF parameters
mrf.nll                 Calculate MRF negative log-likelihood
mrf.stat                Calculate MRF sufficient statistics
mrf.update              Update MRF potentials
sample.chain            Sampling method for chain-structured graphs
sample.conditional      Conditional sampling method
sample.cutset           Sampling method for graphs with a small cutset
sample.exact            Sampling method for small graphs
sample.gibbs            Sampling method using single-site Gibbs sampler
sample.junction         Sampling method for low-treewidth graphs
sample.tree             Sampling method for tree- and forest-structured
                        graphs
sub.crf                 Make sub CRF
train.crf               Train CRF model
train.mrf               Train MRF model
