R: Calculate netDEG p-values

netDEG_pvalue {Corbi} | R Documentation

## Calculate netDEG p-values

### Description

Perform the single or two side tests and calculate the p-values.

### Usage

    netDEG_pvalue(ref.ratio.dist, expr.val, log.expr = FALSE, scale.degree = FALSE)

### Arguments

`ref.ratio.dist` | The expression ratio distribution profile returned by `get_ratio_distribution` or `get_ratio_distribution2`.
`expr.val` | Numeric vector of gene expression values in the sample.
`log.expr` | Logical variable indicating whether the input expression vector is in logarithmic scale.
`scale.degree` | Logical variable indicating whether the degree values are scaled according to the dropout rate.

### Value

This function will return a list with the following components:

`up` | A numeric vector containing the p-values of up-regulation test.
`down` | A numeric vector containing the p-values of down-regulation test.
`twoside` | A numeric vector containing the p-values of twoside test.

[Package Corbi version 0.6-1 Index]