| circos.genomicAxis {circlize} | R Documentation |
Add genomic axes
circos.genomicAxis(h = "top", major.by = NULL, tickLabelsStartFromZero = TRUE,
labels.cex = 0.4*par("cex"), sector.index = get.cell.meta.data("sector.index"),
track.index = get.cell.meta.data("track.index"), ...)
h |
Position of the axes. "top" or "bottom". |
major.by |
Increment of major ticks. It is calculated automatically if the value is not set (about every 10 degrees there is a major tick). |
tickLabelsStartFromZero |
Whether axis tick labels start from 0? This will only affect the axis labels while not affect x-values in cells. |
labels.cex |
the font size for the axis tick labels. |
sector.index |
Index for the sector |
track.index |
Index for the track |
... |
Other arguments pass to |
It assigns proper tick labels under genomic coordinate.
circos.initializeWithIdeogram(plotType = NULL) circos.track(ylim = c(0, 1), panel.fun = function(x, y) circos.genomicAxis()) circos.clear()