| simobsphy {BactDating} | R Documentation |
Simulation of observed phylogeny given a dated tree
simobsphy(tree, mu = 10, sigma = 10, model = "strictgamma")
tree |
Dated tree |
mu |
Substitution clock rate |
sigma |
Per-branch std on the clock rate (used only by relaxed gamma model and negbin model) |
model |
Which model to use (poisson or negbin or strictgamma or relaxedgamma) |
An observed phylogenetic tree