R: Initial tree rooting based on best root-to-tip correlation

initRoot {BactDating} | R Documentation

## Initial tree rooting based on best root-to-tip correlation

### Description

Initial tree rooting based on best root-to-tip correlation

### Usage

    initRoot(phy, date, mtry = 10, useRec = F)

### Arguments

`phy` | An unrooted phylogenetic tree
`date` | Dates of sampling
`mtry` | Average number of rooting attempts per branch
`useRec` | Whether or not to use results from previous recombination analysis

### Value

Rooted tree

[Package BactDating version 1.0 Index]