R: Mantel test (correlation between two distance matrices (in...

mantel.rtest {ade4} | R Documentation

## Mantel test (correlation between two distance matrices (in R).)

### Description

Performs a Mantel test between two distance matrices.

### Usage

    mantel.rtest(m1, m2, nrepet = 99, ...)

### Arguments

`m1` | an object of class `dist`
`m2` | an object of class `dist`
`nrepet` | the number of permutations
`...` | further arguments passed to or from other methods

### Value

an object of class `rtest` (randomization tests)

### Author(s)

Daniel Chessel
Stéphane Dray stephane.dray@univ-lyon1.fr

### References

Mantel, N. (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209–220.

### Examples

        data(yanomama)
        gen <- quasieuclid(as.dist(yanomama$gen))
        geo <- quasieuclid(as.dist(yanomama$geo))
        plot(r1 <- mantel.rtest(geo,gen), main = "Mantel's test")
        r1

[Package ade4 version 1.7-17 Index]