Metadata-Version: 1.1
Name: pandas-plink
Version: 1.2.8
Summary: Read PLINK files into Pandas data frames
Home-page: https://github.com/limix/pandas-plink
Author: Danilo Horta
Author-email: horta@ebi.ac.uk
License: MIT
Description: pandas-plink
        ============
        
        |PyPI-Status| |Conda-Forge-Status| |Conda-Downloads|
        
        |Build-Status| |Codacy-Grade| |License-Badge| |Doc-Status|
        
        PLINK reader for Python.
        It reads binary PLINK files into Pandas_ data frame and Dask_ array.
        This package handles larger-than-memory data sets by reading the SNP matrix
        on-demand.
        
        Install
        -------
        
        The recommended way of installing it is via conda_
        
        .. code:: bash
        
            conda install -c conda-forge pandas-plink
        
        An alternative way would be via pip_
        
        .. code:: bash
        
            pip install pandas-plink
        
        Running the tests
        -----------------
        
        After installation, you can test it
        
        .. code:: bash
        
            python -c "import pandas_plink; pandas_plink.test()"
        
        as long as you have pytest_.
        
        Usage
        -----
        
        It is as simple as
        
        .. code:: python
        
            from pandas_plink import read_plink
            (bim, fam, G) = read_plink('/path/to/data')
        
        Refer to the documentation_ for more information.
        
        Authors
        -------
        
        * `Danilo Horta`_
        
        License
        -------
        
        This project is licensed under the MIT License - see the `License file`_ file
        for details.
        
        .. |Build-Status| image:: https://travis-ci.org/limix/pandas-plink.svg?branch=master
            :target: https://travis-ci.org/limix/pandas-plink
        
        .. |Codacy-Grade| image:: https://api.codacy.com/project/badge/Grade/279d016293724b79ad8e667c1440d3d0
            :target: https://www.codacy.com/app/danilo.horta/pandas-plink?utm_source=github.com&amp;utm_medium=referral&amp;utm_content=limix/pandas-plink&amp;utm_campaign=Badge_Grade
        
        .. |PyPI-Status| image:: https://img.shields.io/pypi/v/pandas-plink.svg
            :target: https://pypi.python.org/pypi/pandas-plink
        
        .. |PyPI-Versions| image:: https://img.shields.io/pypi/pyversions/pandas-plink.svg
            :target: https://pypi.python.org/pypi/pandas-plink
        
        .. |Conda-Forge-Status| image:: https://anaconda.org/conda-forge/pandas-plink/badges/version.svg
            :target: https://anaconda.org/conda-forge/pandas-plink
        
        .. |Conda-Downloads| image:: https://anaconda.org/conda-forge/pandas-plink/badges/downloads.svg
            :target: https://anaconda.org/conda-forge/pandas-plink
        
        .. |License-Badge| image:: https://img.shields.io/pypi/l/pandas-plink.svg
            :target: https://raw.githubusercontent.com/limix/pandas-plink/master/LICENSE.txt
        
        .. |Doc-Status| image:: https://readthedocs.org/projects/pandas-plink/badge/?style=flat-square&version=stable
            :target: https://pandas-plink.readthedocs.io/
        
        .. _License file: https://raw.githubusercontent.com/limix/pandas-plink/master/LICENSE.txt
        
        .. _Danilo Horta: https://github.com/horta
        
        .. _conda: http://conda.pydata.org/docs/index.html
        
        .. _pip: https://pypi.python.org/pypi/pip
        
        .. _pytest: http://docs.pytest.org/en/latest/
        
        .. _Dask: http://dask.pydata.org/en/latest/index.html
        
        .. _Pandas: http://pandas.pydata.org
        
        .. _documentation: http://pandas-plink.readthedocs.io/
        
Keywords: plink,reader,genetics
Platform: any
Classifier: Development Status :: 5 - Production/Stable
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
