# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*-
# vi: set ft=python sts=4 ts=4 sw=4 et:
# -*- coding: utf-8 -*-
"""MRTrix3 provides software tools to perform various types of diffusion MRI analyses."""
from .utils import (
    Mesh2PVE,
    Generate5tt,
    BrainMask,
    TensorMetrics,
    ComputeTDI,
    TCK2VTK,
    MRMath,
    MRConvert,
    MRResize,
    DWIExtract,
    SHConv,
    SH2Amp,
)
from .preprocess import (
    ResponseSD,
    ACTPrepareFSL,
    ReplaceFSwithFIRST,
    DWIPreproc,
    DWIDenoise,
    MRDeGibbs,
    DWIBiasCorrect,
)
from .tracking import Tractography
from .reconst import FitTensor, EstimateFOD, ConstrainedSphericalDeconvolution
from .connectivity import LabelConfig, LabelConvert, BuildConnectome
