Metadata-Version: 2.1
Name: Orange3-SingleCell
Version: 1.1.0
Summary: Add-on for bioinformatics analysis of single cell data
Home-page: https://github.com/biolab/orange3-single-cell
Author: Bioinformatics Laboratory, FRI UL
Author-email: info@biolab.si
License: GPLv3+
Download-URL: https://github.com/biolab/orange3-single-cell/tarball/1.1.0
Keywords: orange3 add-on
Platform: UNKNOWN
Requires-Dist: Orange3 (>=3.22.0)
Requires-Dist: fastdtw
Requires-Dist: joblib (>=0.11)
Requires-Dist: loompy (>=2.0.10)
Requires-Dist: networkx
Requires-Dist: numpy
Requires-Dist: orange3-bioinformatics (>=3.5.0)
Requires-Dist: pandas (>=0.23)
Requires-Dist: scikit-learn

Orange3 Single Cell
======================

The Single Cell add-on for [Orange3](http://orange.biolab.si) adds functionality for analysis of single cell data.

Installation
------------

To install the add-on, run

    pip install .

To register this add-on with Orange, but keep the code in the development directory (do not copy it to 
Python's site-packages directory), run

    pip install -e .

Documentation / widget help can be built by running

    make html htmlhelp

from the doc directory.

Usage
-----

After the installation, the widget from this add-on is registered with Orange. To run Orange from the terminal,
use

    python -m Orange.canvas

The new widget appears in the toolbox bar under the section Single Cell.


