|
RNAlib-2.2.9
|
Global variables for Distance-Package. More...
This graph shows which files directly or indirectly include this file:Go to the source code of this file.
Data Structures | |
| struct | Postorder_list |
| Postorder data structure. More... | |
| struct | Tree |
| Tree data structure. More... | |
| struct | swString |
| Some other data structure. More... | |
Variables | |
| int | edit_backtrack |
| Produce an alignment of the two structures being compared by tracing the editing path giving the minimum distance. More... | |
| char * | aligned_line [4] |
| Contains the two aligned structures after a call to one of the distance functions with edit_backtrack set to 1. | |
| int | cost_matrix |
| Specify the cost matrix to be used for distance calculations. More... | |
Global variables for Distance-Package.
| int edit_backtrack |
Produce an alignment of the two structures being compared by tracing the editing path giving the minimum distance.
set to 1 if you want backtracking
| int cost_matrix |
Specify the cost matrix to be used for distance calculations.
if 0, use the default cost matrix (upper matrix in example), otherwise use Shapiro's costs (lower matrix).