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RNAlib-2.2.7
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Include dependency graph for dp_matrices.h:
This graph shows which files directly or indirectly include this file:Go to the source code of this file.
Data Structures | |
| struct | vrna_mx_mfe_s |
| Minimum Free Energy (MFE) Dynamic Programming (DP) matrices data structure required within the vrna_fold_compound_t. More... | |
| struct | vrna_mx_pf_s |
| Partition function (PF) Dynamic Programming (DP) matrices data structure required within the vrna_fold_compound_t. More... | |
Typedefs | |
| typedef struct vrna_mx_mfe_s | vrna_mx_mfe_t |
| Typename for the Minimum Free Energy (MFE) DP matrices data structure vrna_mx_mfe_s. | |
| typedef struct vrna_mx_pf_s | vrna_mx_pf_t |
| Typename for the Partition Function (PF) DP matrices data structure vrna_mx_pf_s. | |
Enumerations | |
| enum | vrna_mx_type_e { VRNA_MX_DEFAULT, VRNA_MX_WINDOW, VRNA_MX_2DFOLD } |
| An enumerator that is used to specify the type of a polymorphic Dynamic Programming (DP) matrix data structure. More... | |
Functions | |
| int | vrna_mx_add (vrna_fold_compound_t *vc, vrna_mx_type_e type, unsigned int options) |
| Add Dynamic Programming (DP) matrices (allocate memory) More... | |
| void | vrna_mx_mfe_free (vrna_fold_compound_t *vc) |
| Free memory occupied by the Minimum Free Energy (MFE) Dynamic Programming (DP) matrices. More... | |
| void | vrna_mx_pf_free (vrna_fold_compound_t *vc) |
| Free memory occupied by the Partition Function (PF) Dynamic Programming (DP) matrices. More... | |