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RNAlib-2.2.10
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Equilibrium Probability implementations. More...
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Functions | |
| double | vrna_mean_bp_distance_pr (int length, FLT_OR_DBL *pr) |
| Get the mean base pair distance in the thermodynamic ensemble from a probability matrix. More... | |
| double | vrna_mean_bp_distance (vrna_fold_compound_t *vc) |
| Get the mean base pair distance in the thermodynamic ensemble. More... | |
| vrna_plist_t * | vrna_stack_prob (vrna_fold_compound_t *vc, double cutoff) |
| Compute stacking probabilities. More... | |
Equilibrium Probability implementations.
This file includes various implementations for equilibrium probability computations based on the partition function of an RNA sequence, two concatenated sequences, or a sequence alignment.