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RNAlib-2.2.10
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MFE calculations for single RNA sequences. More...
Include dependency graph for mfe.h:
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Functions | |
| float | vrna_mfe (vrna_fold_compound_t *vc, char *structure) |
| Compute minimum free energy and an appropriate secondary structure of an RNA sequence, or RNA sequence alignment. More... | |
| float | vrna_mfe_dimer (vrna_fold_compound_t *vc, char *structure) |
| Compute the minimum free energy of two interacting RNA molecules. More... | |
| float | vrna_mfe_window (vrna_fold_compound_t *vc, FILE *file) |
| Local MFE prediction using a sliding window approach. More... | |
| float | vrna_mfe_window_zscore (vrna_fold_compound_t *vc, double min_z, FILE *file) |
| Local MFE prediction using a sliding window approach (with z-score cut-off) More... | |
MFE calculations for single RNA sequences.
This file includes (almost) all function declarations within the RNAlib that are related to MFE folding...