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RNAlib-2.2.10
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This module contains all functions related to thermodynamic folding of RNAs. More...
Collaboration diagram for RNA Secondary Structure Prediction:Modules | |
| Computing Minimum Free Energy (MFE) Structures | |
| This section covers all functions and variables related to the calculation of minimum free energy (MFE) structures. | |
| Computing Partition Functions and Pair Probabilities | |
| This section provides information about all functions and variables related to the calculation of the partition function and base pair probabilities. | |
| Enumerating Suboptimal Structures | |
| Calculate Secondary Structures of two RNAs upon Dimerization | |
| Predict structures formed by two molecules upon hybridization. | |
| Predicting Consensus Structures from Alignment(s) | |
| compute various properties (consensus MFE structures, partition function, Boltzmann distributed stochastic samples, ...) for RNA sequence alignments | |
| Predicting Locally stable structures of large sequences | |
| Classified Dynamic Programming | |
Files | |
| file | mm.h |
| Several Maximum Matching implementations. | |
This module contains all functions related to thermodynamic folding of RNAs.