Typedef Blosum45BLOSUM45 scoring matrix.
BLOSUM45 scoring matrix.
| Defined in | <seqan/score.h> |
|---|---|
| Signature |
typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecBlosum45> > Blosum45;
|
Overview
A 5
B -1 4
C -1 -2 12
D -2 5 -3 7
E -1 1 -3 2 6
F -2 -3 -2 -4 -3 8
G 0 -1 -3 -1 -2 -3 7
H -2 0 -3 0 0 -2 -2 10
I -1 -3 -3 -4 -3 0 -4 -3 5
J -1 -3 -3 -4 -3 1 -4 -3 4 4
K -1 0 -3 0 1 -3 -2 -1 -3 -3 5
L -1 -3 -2 -3 -2 1 -3 -2 2 4 -3 5
M -1 -2 -2 -3 -2 0 -2 0 2 2 -1 2 6
N -1 4 -2 2 0 -2 0 1 -2 -3 0 -3 -2 6
O 0 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1
P -1 -2 -4 -1 0 -3 -2 -2 -2 -3 -1 -3 -2 -2 -1 9
Q -1 0 -3 0 2 -4 -2 1 -2 -2 1 -2 0 0 -1 -1 6
R -2 -1 -3 -1 0 -2 -2 0 -3 -3 3 -2 -1 0 -1 -2 1 7
S 1 0 -1 0 0 -2 0 -1 -2 -3 -1 -3 -2 1 0 -1 0 -1 4
T 0 0 -1 -1 -1 -1 -2 -2 -1 -1 -1 -1 -1 0 0 -1 -1 -1 2 5
U 0 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1
V 0 -3 -1 -3 -3 0 -3 -3 3 2 -2 1 1 -3 -1 -3 -3 -2 -1 0 -1 5
W -2 -4 -5 -4 -3 1 -2 -3 -2 -2 -2 -2 -2 -4 -2 -3 -2 -2 -4 -3 -2 -3 15
Y -2 -2 -3 -2 -2 3 -3 2 0 0 -1 0 0 -2 -1 -3 -1 -1 -2 -1 -1 -1 3 8
Z -1 2 -3 1 4 -3 -2 0 -3 -3 1 -2 -1 0 -1 -1 4 0 0 -1 -1 -3 -2 -2 4
X 0 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1 -1 -2 -1 -1 -1
* -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 1
A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *