Spec
Super Max Repeats IteratorIterator to search for all supermaximal repeats.
Iterator to search for all supermaximal repeats.
| Extends | BottomUpIterator |
|---|---|
| All Extended | BottomUpIterator, Iter, VSTreeIterator |
| All Impl'd | CopyConstructibleConcept, DefaultConstructibleConcept, EqualityComparableConcept, ForwardIteratorConcept, InputIteratorConcept, IteratorAssociatedTypesConcept |
| Defined in | <seqan/index.h> |
| Signature |
Iterator<TContainer, SuperMaxRepeats>::Type;
template <typename TContainer>
class Iter<TContainer, VSTree<BottomUp<SuperMaxRepeats> > >;
|
Template Parameters
TContainer |
Type of an index that can be iterated with a bottom-up iterator. Types: IndexEsa |
|---|
Member Function Overview
-
Iter::Iter(index[, minLength]);, Iter::Iter(iterator);The constructor
Member Functions Inherited From BottomUpIterator
Member Functions Inherited From Iter
Member Functions Inherited From EqualityComparableConcept
Interface Function Overview
Interface Functions Inherited From BottomUpIterator
Interface Functions Inherited From VSTreeIterator
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Interface Functions Inherited From InputIteratorConcept
Interface Functions Inherited From IteratorAssociatedTypesConcept
Interface Metafunction Overview
Interface Metafunctions Inherited From Iter
Interface Metafunctions Inherited From VSTreeIterator
Interface Metafunctions Inherited From IteratorAssociatedTypesConcept
Detailed Description
Note:
Note Instead of using the class Iter directly we recommend to use the result of the metafunction Iterator<TContainer, SuperMaxRepeats>::Type (which is Iter<TContainer, VSTree<BottomUp<SuperMaxRepeats> &g;t >).
See Also
Member Functions Detail
Iter::Iter(index[, minLength]);
Iter::Iter(iterator);
The constructor
Parameters
index
|
The index to be used for the iteration. Types: IndexEsa |
|---|---|
minLength
|
Minimum length of the supermaximal repeats, default value is 1. |
iterator
|
Another SuperMaxRepeats iterator. Types: SuperMaxRepeatsIterator |
Data Races
Thread safety unknown!