|
|||||||||
| PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
| SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD | ||||||||
java.lang.Objectedu.msu.cme.rdp.classifier.rrnaclassifier.RankAssignment
public class RankAssignment
A RankAssignment holds the classification result of a sequence at one rank level.
| Field Summary | |
|---|---|
private HierarchyTree |
bestClass
|
private float |
confidence
|
| Constructor Summary | |
|---|---|
RankAssignment(HierarchyTree t,
float c)
Creates new RankAssignment. |
|
| Method Summary | |
|---|---|
(package private) HierarchyTree |
getBestClass()
Returns the HierarchyTree which the query sequence is assigned to. |
float |
getConfidence()
Returns the estimate of confidence of the assignment. |
java.lang.String |
getName()
Returns the name of the assigned HierarchyTree. |
java.lang.String |
getRank()
Returns the rank of the assigned HiearchyTree. |
int |
getTaxid()
Returns the taxid of the assigned HierachyTree |
(package private) void |
setConfidence(float f)
Set the confidence of the assignment. |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
| Field Detail |
|---|
private HierarchyTree bestClass
private float confidence
| Constructor Detail |
|---|
RankAssignment(HierarchyTree t,
float c)
| Method Detail |
|---|
public float getConfidence()
HierarchyTree getBestClass()
public java.lang.String getName()
public java.lang.String getRank()
public int getTaxid()
void setConfidence(float f)
|
|||||||||
| PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
| SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD | ||||||||