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java.lang.Objectedu.msu.cme.rdp.classifier.comparison.AbstractNode
edu.msu.cme.rdp.classifier.comparison.UncNode
public class UncNode
| Nested Class Summary | |
|---|---|
(package private) class |
UncNode.DetailIterator
An Iterator of the sequences assigned to the node |
(package private) class |
UncNode.SampleDetailIterator
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| Nested classes/interfaces inherited from class edu.msu.cme.rdp.classifier.comparison.AbstractNode |
|---|
AbstractNode.LineageIterator, AbstractNode.TaxonIterator |
| Constructor Summary | |
|---|---|
UncNode(AbstractNode p)
Creates a new instance of UncNode |
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| Method Summary | |
|---|---|
void |
changeConfidence(SigCalculator cal)
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ComparisonBrowserNode |
findNode(int id)
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java.util.Iterator |
getDetailIterator(float conf)
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(package private) AbstractNode |
getFirstChild()
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java.lang.String |
getName()
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java.lang.String |
getRank()
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int |
getTaxid()
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| Methods inherited from class edu.msu.cme.rdp.classifier.comparison.AbstractNode |
|---|
addSibling, getDoubleSignificance, getIndent, getLineageIterator, getNextSibling, getParent, getS1Count, getS2Count, getSignificance, getTaxonIterator, incS1Count, incS2Count, resetCount, setIndent, setParent, setSignificance |
| Methods inherited from class java.lang.Object |
|---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
| Constructor Detail |
|---|
UncNode(AbstractNode p)
| Method Detail |
|---|
AbstractNode getFirstChild()
getFirstChild in class AbstractNodepublic java.lang.String getName()
getName in interface TaxongetName in class AbstractNodepublic java.lang.String getRank()
getRank in interface TaxongetRank in class AbstractNodepublic int getTaxid()
getTaxid in interface TaxongetTaxid in class AbstractNodepublic ComparisonBrowserNode findNode(int id)
findNode in interface ComparisonBrowserNodefindNode in class AbstractNodepublic void changeConfidence(SigCalculator cal)
changeConfidence in interface ComparisonBrowserNodechangeConfidence in class AbstractNodepublic java.util.Iterator getDetailIterator(float conf)
getDetailIterator in interface ComparisonBrowserNodegetDetailIterator in class AbstractNode
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