VirFinder: identifying viral sequences from metagenomic data using sequence signatures

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Documentation for package ‘VirFinder’ version 1.1

• DESCRIPTION file.

Help Pages

VirFinder-package	An R package for predicting viral sequences in a fasta file.
VF.pred	Identify viral sequences in a fasta file
VF.pred.user	Identify viral sequences in a fasta file using user's trained prediction model
VF.qvalue	Estimate the false discovery rates (q-values) using p-values
VF.train.user	Train virus prediction model using user's database
VF.trainMod8mer	The prediction models trained using sequences of various lengths from virus and host complete genomes.
VirFinder	An R package for predicting viral sequences in a fasta file.