Order Restricted Assessment Of Microarray Titration Experiments

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Documentation for package ‘orQA’ version 0.2.1

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orQA-package Order restricted quality assessment of microarray titration data
e2test Perform permutation Barlow's test on a dataset
est.lme Estimate order restricted variance components for a two way mixed model with interaction.
guo Mixed directional FDR controlled test decisions
misoreg Apply isotonic regression to each line of a matrix
monotonicity Summarize results from 'pttest'
orQA Order restricted quality assessment of microarray titration data
pttest Perform permutation t-tests between consecutive levels of ordered groups
sigdirE2test Summarize results from 'e2test'
sigdirPttest Summarize results from 'pttest'