| Getting Started With CellProfiler! | ||
| CellProfiler is automated image analysis software to measure biological phenotypes in images. | ||
| See a pipeline in action | ||
| Load an example pipeline, then click on the "Analyze Images" button. | ||
| Build your own pipeline | ||
| 1: Start | Download a pipeline template from our website of examples. Load it with File > Import > Pipeline from File.... Run it, then modify it to suit your assay. | |
| 2: Adjust | Use the Input modules to select and configure your images for analysis. Add Analysis modules to identify image features, make measurements and export results. | |
| 3: Test | Click the "Start Test Mode" button to step through the pipeline and check the module settings on a few images. | |
| 4: Analyze | Click the "Analyze Images" button to process all of your images with your pipeline. | |