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| igvParam | Parameters for displaying bigwigs, bams and intervals in IGV |
| igvParam-class | Parameters for displaying bigwigs, bams and intervals in IGV |
| Intervals | Example genomic intervals |
| makebedtable | Make HTML pages for interval files or GRanges. |
| MakeIGVSampleMetadata | Make sample metadata file for use with IGV. |
| MakeIGVSession | Make IGV session XML and sample information file |
| MakeIGVSessionXML | Make IGV session XML |
| maketracktable | Make HTML pages for IGV sessions (Tracktables Experiment Report) |