| appTEKRABber | Visualize TEKRABber results with shiny app |
| assay_tekcorrset | Access genes and transposable elements expression data |
| corrOrthologTE | Estimate correlation comparing orthologs and TEs |
| ctCorr | Normalized Gene/TE expression toy data in control and treatment in same species for correlation analysis |
| ctInputDE | Input expression data of gene/TE for differentially expressed analysis within same species |
| DECorrInputs | Generate all the input files for TEKRABber downstream analysis |
| DEgeneTE | Estimate differentially expressed genes and TEs |
| fetchDataHmChimp | Orthology information of human and chimpanzee with scaling factor |
| orthologScale | Get orthology information from Ensembl |
| rcpp_corr | Estimate the correlation between genes and transposable elements |
| speciesCorr | A subsets of normalized Gene/TE expression data from human/chimpanzee brain RNA-seq for correlation analysis demonstration |
| speciesCounts | Gene/TE expression data from human/chimpanzee brain RNA-seq |
| TEKRABber | An R package estimates the correlations of orthologs and transposable elements between two species |