Switch-like differential expression across single-cell trajectories

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Documentation for package ‘switchde’ version 1.4.0

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example_sigmoid Example sigmoid plot
extract_pars Extract parameters from fitted model
ex_pseudotime Synthetic gene pseudotimes
fit_nzi_model Fit a (non-zero-inflated) model for a single gene
fit_zi_model Fit a zero-inflated model for a single gene
switchde Switch-like model fitting and differential expression test
switchplot Plot gene behaviour
synth_gex Synthetic gene expression matrix