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| SimBindProfiles-package | Similar Binding Profiles, identifies common and unique regions in array genome tiling array data |
| bound.cutoff | A Sample Data object |
| compensationRegions | Classify two Binding Profiles - Compensation |
| compR | A Sample Data object |
| eSetScatterPlot | Scatterplot of ExpressionSet object |
| findBoundCutoff | Find the bound.cutoff |
| increasedBindingRegions | Classify two Binding Profiles - Increased Binding |
| increasedR | A Sample Data object |
| pairwiseRegions | Classify two Binding Profiles |
| plotBoundProbes | Plot coloured bound probes |
| precomputed | A Sample Data object |
| probeAnnoFromESet | Build a probeAnno from ExpressionSet |
| probeLengthPlot | Plot the probe length frequency |
| readSgrFiles | Read sgr data |
| SGR | A Sample Data object |
| SimBindProfiles | Similar Binding Profiles, identifies common and unique regions in array genome tiling array data |
| threewayRegions | Classify three Binding Profiles |