| SAIGEgds-package | Scalable Implementation of Generalized mixed models in Phenome-Wide Association Studies using GDS files |
| pACAT | Cauchy Combination Test |
| pACAT2 | Cauchy Combination Test |
| SAIGEgds | Scalable Implementation of Generalized mixed models in Phenome-Wide Association Studies using GDS files |
| seqAssocGLMM_SPA | P-value calculation |
| seqAssocGLMM_spaACAT_O | ACAT-V tests |
| seqAssocGLMM_spaACAT_V | ACAT-V tests |
| seqAssocGLMM_spaBurden | Burden tests |
| seqFitNullGLMM_SPA | Fit the null model with GRM |
| seqSAIGE_LoadPval | Load the association results |