RUV for normalization of expression array data

Documentation for package ‘RUVnormalize’ version 1.14.0

clScore	Computes a distance between two partitions of the same data
iterativeRUV	Remove unwanted variation from a gene expression matrix using control genes, optionally replicate samples, and iterative estimates of the factor of interest
naiveRandRUV	Remove unwanted variation from a gene expression matrix using negative control genes
naiveReplicateRUV	Remove unwanted variation from a gene expression matrix using replicate samples
svdPlot	Plot the data projected into the space spanned by their first two principal components