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| addCyEdge | addCyEdge |
| addCyEdge-method | addCyEdge |
| addCyNode | addCyNode |
| addCyNode-method | addCyNode |
| addGraphToGraph | addGraphToGraph |
| addGraphToGraph-method | addGraphToGraph |
| clearMsg | clearMsg |
| clearMsg-method | clearMsg |
| clearSelection | clearSelection |
| clearSelection-method | clearSelection |
| copyVisualStyle | copyVisualStyle |
| copyVisualStyle-method | copyVisualStyle |
| createWindow | createWindow |
| createWindow-method | createWindow |
| createWindowFromSelection | createWindowFromSelection |
| createWindowFromSelection-method | createWindowFromSelection |
| cy2.edge.names | cy2.edge.names |
| CytoscapeConnection | CytoscapeConnection |
| CytoscapeConnectionClass-class | Class "CytoscapeConnectionClass" |
| CytoscapeWindow | CytoscapeWindow |
| CytoscapeWindowClass-class | Class "CytoscapeWindowClass" |
| deleteAllWindows | deleteAllWindows |
| deleteAllWindows-method | deleteAllWindows |
| deleteEdgeAttribute | deleteEdgeAttribute |
| deleteEdgeAttribute-method | deleteEdgeAttribute |
| deleteNodeAttribute | deleteNodeAttribute |
| deleteNodeAttribute-method | deleteNodeAttribute |
| deleteSelectedEdges | deleteSelectedEdges |
| deleteSelectedEdges-method | deleteSelectedEdges |
| deleteSelectedNodes | deleteSelectedNodes |
| deleteSelectedNodes-method | deleteSelectedNodes |
| deleteWindow | deleteWindow |
| deleteWindow-method | deleteWindow |
| demoSimpleGraph | demoSimpleGraph |
| displayGraph | displayGraph |
| displayGraph-method | displayGraph |
| dockPanel | dockPanel |
| dockPanel-method | dockPanel |
| eda | eda |
| eda.names | eda.names |
| existing.CytoscapeWindow | existing.CytoscapeWindow |
| fitContent | fitContent |
| fitContent-method | fitContent |
| fitSelectedContent | fitSelectedContent |
| fitSelectedContent-method | fitSelectedContent |
| floatPanel | floatPanel |
| floatPanel-method | floatPanel |
| hideAllPanels | hideAllPanels |
| hideAllPanels-method | hideAllPanels |
| hideNodes | hideNodes |
| hideNodes-method | hideNodes |
| hidePanel | hidePanel |
| hidePanel-method | hidePanel |
| hideSelectedEdges | hideSelectedEdges |
| hideSelectedEdges-method | hideSelectedEdges |
| hideSelectedNodes | hideSelectedNodes |
| hideSelectedNodes-method | hideSelectedNodes |
| initEdgeAttribute | initEdgeAttribute |
| initNodeAttribute | initNodeAttribute |
| invertEdgeSelection | invertEdgeSelection |
| invertEdgeSelection-method | invertEdgeSelection |
| invertNodeSelection | invertNodeSelection |
| invertNodeSelection-method | invertNodeSelection |
| layoutNetwork | layoutNetwork |
| layoutNetwork-method | layoutNetwork |
| lockNodeDimensions | lockNodeDimensions |
| lockNodeDimensions-method | lockNodeDimensions |
| makeRandomGraph | makeRandomGraph |
| makeSimpleGraph | makeSimpleGraph |
| msg | msg |
| msg-method | msg |
| new.CytoscapeWindow | new.CytoscapeWindow |
| noa | noa |
| noa.names | noa.names |
| ping | ping |
| ping-method | ping |
| pluginVersion | pluginVersion |
| pluginVersion-method | pluginVersion |
| predictTimeToDisplayGraph | predictTimeToDisplayGraph |
| predictTimeToDisplayGraph-method | predictTimeToDisplayGraph |
| raiseWindow | raiseWindow |
| raiseWindow-method | raiseWindow |
| redraw | redraw |
| redraw-method | redraw |
| restoreLayout | restoreLayout |
| restoreLayout-method | restoreLayout |
| saveImage | saveImage |
| saveImage-method | saveImage |
| saveLayout | saveLayout |
| saveLayout-method | saveLayout |
| saveNetwork | saveNetwork |
| saveNetwork-method | saveNetwork |
| selectEdges | selectEdges |
| selectEdges-method | selectEdges |
| selectFirstNeighborsOfSelectedNodes | selectFirstNeighborsOfSelectedNodes |
| selectFirstNeighborsOfSelectedNodes-method | selectFirstNeighborsOfSelectedNodes |
| selectNodes | selectNodes |
| selectNodes-method | selectNodes |
| sendEdges | sendEdges |
| sendEdges-method | sendEdges |
| sendNodes | sendNodes |
| sendNodes-method | sendNodes |
| setCenter | setCenter |
| setCenter-method | setCenter |
| setDefaultBackgroundColor | setDefaultBackgroundColor |
| setDefaultBackgroundColor-method | setDefaultBackgroundColor |
| setDefaultEdgeColor | setDefaultEdgeColor |
| setDefaultEdgeColor-method | setDefaultEdgeColor |
| setDefaultEdgeFontSize | setDefaultEdgeFontSize |
| setDefaultEdgeFontSize-method | setDefaultEdgeFontSize |
| setDefaultEdgeLineWidth | setDefaultEdgeLineWidth |
| setDefaultEdgeLineWidth-method | setDefaultEdgeLineWidth |
| setDefaultEdgeReverseSelectionColor | setDefaultEdgeReverseSelectionColor |
| setDefaultEdgeReverseSelectionColor-method | setDefaultEdgeReverseSelectionColor |
| setDefaultEdgeSelectionColor | setDefaultEdgeSelectionColor |
| setDefaultEdgeSelectionColor-method | setDefaultEdgeSelectionColor |
| setDefaultNodeBorderColor | setDefaultNodeBorderColor |
| setDefaultNodeBorderColor-method | setDefaultNodeBorderColor |
| setDefaultNodeBorderWidth | setDefaultNodeBorderWidth |
| setDefaultNodeBorderWidth-method | setDefaultNodeBorderWidth |
| setDefaultNodeColor | setDefaultNodeColor |
| setDefaultNodeColor-method | setDefaultNodeColor |
| setDefaultNodeFontSize | setDefaultNodeFontSize |
| setDefaultNodeFontSize-method | setDefaultNodeFontSize |
| setDefaultNodeLabelColor | setDefaultNodeLabelColor |
| setDefaultNodeLabelColor-method | setDefaultNodeLabelColor |
| setDefaultNodeReverseSelectionColor | setDefaultNodeReverseSelectionColor |
| setDefaultNodeReverseSelectionColor-method | setDefaultNodeReverseSelectionColor |
| setDefaultNodeSelectionColor | setDefaultNodeSelectionColor |
| setDefaultNodeSelectionColor-method | setDefaultNodeSelectionColor |
| setDefaultNodeShape | setDefaultNodeShape |
| setDefaultNodeShape-method | setDefaultNodeShape |
| setDefaultNodeSize | setDefaultNodeSize |
| setDefaultNodeSize-method | setDefaultNodeSize |
| setEdgeAttributes | setEdgeAttributes |
| setEdgeAttributes-method | setEdgeAttributes |
| setEdgeAttributesDirect | setEdgeAttributesDirect |
| setEdgeAttributesDirect-method | setEdgeAttributesDirect |
| setEdgeColorDirect | setEdgeColorDirect |
| setEdgeColorDirect-method | setEdgeColorDirect |
| setEdgeColorRule | setEdgeColorRule |
| setEdgeColorRule-method | setEdgeColorRule |
| setEdgeFontSizeDirect | setEdgeFontSizeDirect |
| setEdgeFontSizeDirect-method | setEdgeFontSizeDirect |
| setEdgeLabelColorDirect | setEdgeLabelColorDirect |
| setEdgeLabelColorDirect-method | setEdgeLabelColorDirect |
| setEdgeLabelDirect | setEdgeLabelDirect |
| setEdgeLabelDirect-method | setEdgeLabelDirect |
| setEdgeLabelOpacityDirect | setEdgeLabelOpacityDirect |
| setEdgeLabelOpacityDirect-method | setEdgeLabelOpacityDirect |
| setEdgeLabelRule | setEdgeLabelRule |
| setEdgeLabelRule-method | setEdgeLabelRule |
| setEdgeLabelWidthDirect | setEdgeLabelWidthDirect |
| setEdgeLabelWidthDirect-method | setEdgeLabelWidthDirect |
| setEdgeLineStyleDirect | setEdgeLineStyleDirect |
| setEdgeLineStyleDirect-method | setEdgeLineStyleDirect |
| setEdgeLineStyleRule | specify the line styles to be used in drawing edges |
| setEdgeLineStyleRule-method | specify the line styles to be used in drawing edges |
| setEdgeLineWidthDirect | setEdgeLineWidthDirect |
| setEdgeLineWidthDirect-method | setEdgeLineWidthDirect |
| setEdgeLineWidthRule | setEdgeLineWidthRule |
| setEdgeLineWidthRule-method | setEdgeLineWidthRule |
| setEdgeOpacityDirect | setEdgeOpacityDirect |
| setEdgeOpacityDirect-method | setEdgeOpacityDirect |
| setEdgeOpacityRule | setEdgeOpacityRule |
| setEdgeOpacityRule-method | setEdgeOpacityRule |
| setEdgeSourceArrowColorDirect | setEdgeSourceArrowColorDirect |
| setEdgeSourceArrowColorDirect-method | setEdgeSourceArrowColorDirect |
| setEdgeSourceArrowColorRule | Specify Rule for the Source Arrow Color |
| setEdgeSourceArrowColorRule-method | Specify Rule for the Source Arrow Color |
| setEdgeSourceArrowOpacityDirect | setEdgeSourceArrowOpacityDirect |
| setEdgeSourceArrowOpacityDirect-method | setEdgeSourceArrowOpacityDirect |
| setEdgeSourceArrowRule | specify the arrow types to be used at the end of an edge, at the 'source' node |
| setEdgeSourceArrowRule-method | specify the arrow types to be used at the end of an edge, at the 'source' node |
| setEdgeSourceArrowShapeDirect | setEdgeSourceArrowShapeDirect |
| setEdgeSourceArrowShapeDirect-method | setEdgeSourceArrowShapeDirect |
| setEdgeTargetArrowColorDirect | setEdgeTargetArrowColorDirect |
| setEdgeTargetArrowColorDirect-method | setEdgeTargetArrowColorDirect |
| setEdgeTargetArrowColorRule | Specify Rule for the Target Arrow Color |
| setEdgeTargetArrowColorRule-method | Specify Rule for the Target Arrow Color |
| setEdgeTargetArrowOpacityDirect | setEdgeTargetArrowOpacityDirect |
| setEdgeTargetArrowOpacityDirect-method | setEdgeTargetArrowOpacityDirect |
| setEdgeTargetArrowRule | specify the arrow types to be used at the end of an edge, at the 'target' node |
| setEdgeTargetArrowRule-method | specify the arrow types to be used at the end of an edge, at the 'target' node |
| setEdgeTargetArrowShapeDirect | setEdgeTargetArrowShapeDirect |
| setEdgeTargetArrowShapeDirect-method | setEdgeTargetArrowShapeDirect |
| setEdgeTooltipDirect | setEdgeTooltipDirect |
| setEdgeTooltipDirect-method | setEdgeTooltipDirect |
| setEdgeTooltipRule | setEdgeTooltipRule |
| setEdgeTooltipRule-method | setEdgeTooltipRule |
| setGraph | setGraph |
| setGraph-method | setGraph |
| setLayoutProperties | setLayoutProperties |
| setLayoutProperties-method | setLayoutProperties |
| setNodeAttributes | setNodeAttributes |
| setNodeAttributes-method | setNodeAttributes |
| setNodeAttributesDirect | setNodeAttributesDirect |
| setNodeAttributesDirect-method | setNodeAttributesDirect |
| setNodeBorderColorDirect | setNodeBorderColorDirect |
| setNodeBorderColorDirect-method | setNodeBorderColorDirect |
| setNodeBorderColorRule | setNodeBorderColorRule |
| setNodeBorderColorRule-method | setNodeBorderColorRule |
| setNodeBorderOpacityDirect | setNodeBorderOpacityDirect |
| setNodeBorderOpacityDirect-method | setNodeBorderOpacityDirect |
| setNodeBorderWidthDirect | setNodeBorderWidthDirect |
| setNodeBorderWidthDirect-method | setNodeBorderWidthDirect |
| setNodeBorderWidthRule | setNodeBorderWidthRule |
| setNodeBorderWidthRule-method | setNodeBorderWidthRule |
| setNodeColorDirect | setNodeColorDirect |
| setNodeColorDirect-method | setNodeColorDirect |
| setNodeColorRule | setNodeColorRule |
| setNodeColorRule-method | setNodeColorRule |
| setNodeFillOpacityDirect | setNodeFillOpacityDirect |
| setNodeFillOpacityDirect-method | setNodeFillOpacityDirect |
| setNodeFontSizeDirect | setNodeFontSizeDirect |
| setNodeFontSizeDirect-method | setNodeFontSizeDirect |
| setNodeHeightDirect | setNodeHeightDirect |
| setNodeHeightDirect-method | setNodeHeightDirect |
| setNodeImageDirect | setNodeImageDirect |
| setNodeImageDirect-method | setNodeImageDirect |
| setNodeLabelColorDirect | setNodeLabelColorDirect |
| setNodeLabelColorDirect-method | setNodeLabelColorDirect |
| setNodeLabelDirect | setNodeLabelDirect |
| setNodeLabelDirect-method | setNodeLabelDirect |
| setNodeLabelOpacityDirect | setNodeLabelOpacityDirect |
| setNodeLabelOpacityDirect-method | setNodeLabelOpacityDirect |
| setNodeLabelRule | setNodeLabelRule |
| setNodeLabelRule-method | setNodeLabelRule |
| setNodeOpacityDirect | setNodeOpacityDirect |
| setNodeOpacityDirect-method | setNodeOpacityDirect |
| setNodeOpacityRule | setNodeOpacityRule |
| setNodeOpacityRule-method | setNodeOpacityRule |
| setNodePosition | setNodePosition |
| setNodePosition-method | setNodePosition |
| setNodeShapeDirect | setNodeShapeDirect |
| setNodeShapeDirect-method | setNodeShapeDirect |
| setNodeShapeRule | setNodeShapeRule |
| setNodeShapeRule-method | setNodeShapeRule |
| setNodeSizeDirect | setNodeSizeDirect |
| setNodeSizeDirect-method | setNodeSizeDirect |
| setNodeSizeRule | setNodeSizeRule |
| setNodeSizeRule-method | setNodeSizeRule |
| setNodeTooltipRule | setNodeTooltipRule |
| setNodeTooltipRule-method | setNodeTooltipRule |
| setNodeWidthDirect | setNodeWidthDirect |
| setNodeWidthDirect-method | setNodeWidthDirect |
| setTooltipDismissDelay | setTooltipDismissDelay |
| setTooltipDismissDelay-method | setTooltipDismissDelay |
| setTooltipInitialDelay | setTooltipInitialDelay |
| setTooltipInitialDelay-method | setTooltipInitialDelay |
| setVisualStyle | setVisualStyle |
| setVisualStyle-method | setVisualStyle |
| setWindowSize | setWindowSize |
| setWindowSize-method | setWindowSize |
| setZoom | setZoom |
| setZoom-method | setZoom |
| sfn | selectFirstNeighborsOfSelectedNodes |
| sfn-method | selectFirstNeighborsOfSelectedNodes |
| showGraphicsDetails | showGraphicsDetails |
| showGraphicsDetails-method | showGraphicsDetails |
| unhideAll | unhideAll |
| unhideAll-method | unhideAll |