| ncGTW-package | ncGTW: A package for detecting and aligning the misaligned features in LC-MS data |
| adjustRT | Adjust retention time |
| alignData | ncGTWoutput-accessors |
| alignData-method | ncGTWoutput-accessors |
| compCV | Compare CV |
| downSample | ncGTWinput-accessors |
| downSample-method | ncGTWinput-accessors |
| fillPeaksChromPar | Edited XCMS fillPeaksChromPar for feature-wise warping functions |
| getPeaksncGTW | Edited XCMS getPeaks for feature-wise warping functions |
| groupInfo | ncGTWinput-accessors |
| groupInfo-method | ncGTWinput-accessors |
| loadProfile | Load sample profiles for each peak group |
| meanCorOl | Compute average pairwise correlation and overlapping area |
| misalignDetect | Detect misaligned peak groups in xcmsSet object of XCMS |
| ncGTW | ncGTW: A package for detecting and aligning the misaligned features in LC-MS data |
| ncGTWalign | Run ncGTW alignment |
| ncGTWinput | Class "ncGTWinput" |
| ncGTWinput-class | Class "ncGTWinput" |
| ncGTWoutput | Class "ncGTWoutput" |
| ncGTWoutput-class | Class "ncGTWoutput" |
| ncGTWparam | Class "ncGTWparam" |
| ncGTWparam-class | Class "ncGTWparam" |
| ncGTWpath | ncGTWinput-accessors |
| ncGTWpath-method | ncGTWinput-accessors |
| ncGTWpeaks | ncGTWwarp-accessors |
| ncGTWpeaks-method | ncGTWwarp-accessors |
| ncGTWwarp | Class "ncGTWwarp" |
| ncGTWwarp-class | Class "ncGTWwarp" |
| plotGroup | Plot profiles for each peak group |
| profiles | ncGTWinput-accessors |
| profiles-method | ncGTWinput-accessors |
| rtncGTW | ncGTWwarp-accessors |
| rtncGTW-method | ncGTWwarp-accessors |
| rtRaw | ncGTWinput-accessors |
| rtRaw-method | ncGTWinput-accessors |
| scanRange | ncGTWinput-accessors |
| scanRange-method | ncGTWinput-accessors |
| xcmsExamples | Examples of xcmsSet for inputs of ncGTW |