| mzR-package | parser for mzXML, mzData, mzML and mzid files (mass spectrometry data) |
| analyzer | Access the metadata from an 'mzR' object. |
| analyzer-method | Class 'mzR' and sub-classes |
| chromatogram | Access the raw data from an 'mzR' object. |
| chromatogram-method | Access the raw data from an 'mzR' object. |
| chromatograms | Access the raw data from an 'mzR' object. |
| chromatograms-method | Access the raw data from an 'mzR' object. |
| chromatogramsInfo | Access the metadata from an 'mzR' object. |
| chromatogramsInfo-method | Class 'mzR' and sub-classes |
| class:mzR | Class 'mzR' and sub-classes |
| class:mzRident | Class 'mzR' and sub-classes |
| class:mzRnetCDF | Class 'mzR' and sub-classes |
| class:mzRpwiz | Class 'mzR' and sub-classes |
| class:mzRramp | Class 'mzR' and sub-classes |
| close | Class 'mzR' and sub-classes |
| close-method | Class 'mzR' and sub-classes |
| copyWriteMSData | Write MS spectrum data to a MS file copying metadata from the originating file |
| database | Access the metadata from an 'mzR' object. |
| database-method | Class 'mzR' and sub-classes |
| detector | Access the metadata from an 'mzR' object. |
| detector-method | Class 'mzR' and sub-classes |
| enzymes | Access the metadata from an 'mzR' object. |
| enzymes-method | Class 'mzR' and sub-classes |
| fileName | Create and check mzR objects from netCDF, mzXML, mzData or mzML files. |
| fileName-method | Class 'mzR' and sub-classes |
| get3Dmap | Access the raw data from an 'mzR' object. |
| get3Dmap-method | Access the raw data from an 'mzR' object. |
| header | Access the raw data from an 'mzR' object. |
| header-method | Access the raw data from an 'mzR' object. |
| initializeRamp | Create and check mzR objects from netCDF, mzXML, mzData or mzML files. |
| initializeRamp-method | Class 'mzR' and sub-classes |
| instrumentInfo | Access the metadata from an 'mzR' object. |
| instrumentInfo-method | Class 'mzR' and sub-classes |
| ionisation | Access the metadata from an 'mzR' object. |
| ionisation-method | Class 'mzR' and sub-classes |
| isInitialized | Create and check mzR objects from netCDF, mzXML, mzData or mzML files. |
| isInitialized-method | Class 'mzR' and sub-classes |
| isolationWindow | Returns the ion selection isolation window |
| isolationWindow-method | Returns the ion selection isolation window |
| isolationWindow-methods | Returns the ion selection isolation window |
| length | Class 'mzR' and sub-classes |
| length-method | Class 'mzR' and sub-classes |
| manufacturer | Access the metadata from an 'mzR' object. |
| manufacturer-method | Class 'mzR' and sub-classes |
| model | Access the metadata from an 'mzR' object. |
| model-method | Class 'mzR' and sub-classes |
| modifications | Access the metadata from an 'mzR' object. |
| modifications-method | Class 'mzR' and sub-classes |
| mzidInfo | Access the metadata from an 'mzR' object. |
| mzidInfo-method | Class 'mzR' and sub-classes |
| mzR | parser for mzXML, mzData, mzML and mzid files (mass spectrometry data) |
| mzR-class | Class 'mzR' and sub-classes |
| mzRident-class | Class 'mzR' and sub-classes |
| mzRnetCDF-class | Class 'mzR' and sub-classes |
| mzRpwiz-class | Class 'mzR' and sub-classes |
| mzRramp-class | Class 'mzR' and sub-classes |
| nChrom | Access the raw data from an 'mzR' object. |
| openIDfile | Create and check mzR objects from netCDF, mzXML, mzData or mzML files. |
| openMSfile | Create and check mzR objects from netCDF, mzXML, mzData or mzML files. |
| para | Access the metadata from an 'mzR' object. |
| para-method | Class 'mzR' and sub-classes |
| peaks | Access the raw data from an 'mzR' object. |
| peaks-method | Access the raw data from an 'mzR' object. |
| peaksCount | Access the raw data from an 'mzR' object. |
| peaksCount-method | Access the raw data from an 'mzR' object. |
| psms | Access the metadata from an 'mzR' object. |
| psms-method | Class 'mzR' and sub-classes |
| pwiz.version | Get the version number of pwiz backend. |
| runInfo | Access the metadata from an 'mzR' object. |
| runInfo-method | Class 'mzR' and sub-classes |
| sampleInfo | Access the metadata from an 'mzR' object. |
| sampleInfo-method | Class 'mzR' and sub-classes |
| score | Access the metadata from an 'mzR' object. |
| score-method | Class 'mzR' and sub-classes |
| softwareInfo | Access the metadata from an 'mzR' object. |
| softwareInfo-method | Class 'mzR' and sub-classes |
| sourceInfo | Access the metadata from an 'mzR' object. |
| sourceInfo-method | Class 'mzR' and sub-classes |
| spectra | Access the raw data from an 'mzR' object. |
| spectra-method | Access the raw data from an 'mzR' object. |
| substitutions | Access the metadata from an 'mzR' object. |
| substitutions-method | Class 'mzR' and sub-classes |
| tic | Access the raw data from an 'mzR' object. |
| tic-method | Access the raw data from an 'mzR' object. |
| tolerance | Access the metadata from an 'mzR' object. |
| tolerance-method | Class 'mzR' and sub-classes |
| writeMSData | Write MS spectrum data to an MS file |
| writeMSData-method | Write MS spectrum data to an MS file |