R Interface to the metaviz web app for interactive metagenomics data analysis and visualization

Documentation for package ‘metavizr’ version 1.2.1

buildMetavizGraph	Build a MetavizTree object from another object
buildMetavizGraph-method	Build a MetavizTree object from another object
EpivizMetagenomicsData	Data container for MRexperiment objects
EpivizMetagenomicsData-class	Data container for MRexperiment objects
generateSelection	Method to select and set aggregation type to nodes in FacetZoom
MetavizApp	Class managing connection to metaviz application.
MetavizApp-class	Class managing connection to metaviz application.
metavizControl	metavizr settings
MetavizGraph	Graph implementation to query hierarchical feature data
MetavizGraph-class	Graph implementation to query hierarchical feature data
register-method	Generic method to register data to the epiviz data server
register-method	Generic method to register data to the epiviz data server
replaceNAFeatures	Method to replace NA or null feature labels with Not_Annotated_hierarchy-level
setMetavizStandalone	set metaviz app standalone settings
startMetaviz	Start metaviz app and create 'MetavizApp' object to manage connection.
startMetavizStandalone	Start metaviz app in standalone (locally) and create 'MetavizApp' object to manage connection.
validateObject	validate 'MRexperiment-class' object