A k-tables approach to integrate multiple Omics-Data

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Documentation for package ‘kimod’ version 1.6.0

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B C D E G I L N P Q R S T W

-- B --

Biplot Plot a 'Biplot' of a SelectVar class object
Biplot-method Plot a 'Biplot' of a SelectVar class object
BootPlot Plot a 'BootPlot' of a Bootstrap object
BootPlot-method Plot a 'BootPlot' of a Bootstrap object
Bootstrap Funtion 'Bootstrap' of a DiStatis object
Bootstrap-class Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Bootstrap-method Funtion 'Bootstrap' of a DiStatis object
Bootstrap-methods Funtion 'Bootstrap' of a DiStatis object

-- C --

class:DiStatis Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Comparisions.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Comparisions.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Comparisions.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
CompPlot Plot a 'CompPlot' of a DiStatis object
CompPlot-method Plot a 'CompPlot' of a DiStatis object
Compromise.Coords Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Compromise.Coords-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Compromise.Coords<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Compromise.Matrix Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Compromise.Matrix-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Compromise.Matrix<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Coord.Select Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
Coord.Select-method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
Coord.Select<--method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.

-- D --

DiStatis 'DiStatis' of a DiStatis object High level constructor of DiStatis class object
DiStatis-class Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
DiStatis-methods 'DiStatis' of a DiStatis object High level constructor of DiStatis class object

-- E --

EigValues.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
EigValues.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
EigValues.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Elipses.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Elipses.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Elipses.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Euclid.Im Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Euclid.Im-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Euclid.Im<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)

-- G --

GroupProj 'GroupProj' of SelectVar object
GroupProj-class Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
GroupProj-method 'GroupProj' of SelectVar object
GroupProj-SelectVar-methods 'GroupProj' of SelectVar object
Groups Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
Groups-method Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
Groups<--method Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.

-- I --

Inertia.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.comp Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.comp-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.comp<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.RV Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.RV-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Inertia.RV<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)

-- L --

List.Selec.Est Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
List.Selec.Est-method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
List.Selec.Est<--method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
List.Selec.Var Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
List.Selec.Var-method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
List.Selec.Var<--method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.

-- N --

NCI60Selec Microarray gene expression profiles of the NCI 60 cell lines from 4 different platforms.
NCI60Selec_ESet Microarray gene expression profiles of the NCI 60 cell lines from 4 different platforms.

-- P --

PanelPlot Plot a 'PanelPlot' of a DiStatis object
PanelPlot-method Plot a 'PanelPlot' of a DiStatis object
print-method 'print' or 'summary' a Bootstrap object
print-method 'print.DiStatis' a DiStatis object Generic Print/Summary method for DiStatis class output visualization.
print-method 'print.GP' a GroupProj object Generic print.GP method for GroupProj class output visualization.
print-method 'print.SV' a SelectVar object Generic Print/Summary method for SelectVar class output visualization.
print.Bootstrap 'print' or 'summary' a Bootstrap object
print.DiStatis 'print.DiStatis' a DiStatis object Generic Print/Summary method for DiStatis class output visualization.
print.GP 'print.GP' a GroupProj object Generic print.GP method for GroupProj class output visualization.
print.SV 'print.SV' a SelectVar object Generic Print/Summary method for SelectVar class output visualization.
ProyGroups Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
ProyGroups-method Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
ProyGroups<--method Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.

-- Q --

QRO.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
QRO.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
QRO.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)

-- R --

Ratios.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Ratios.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Ratios.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RQO Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RQO-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RQO<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RV Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RV-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RV<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
RVPlot Plot a 'RVPlot' of a DiStatis object
RVPlot-method Plot a 'RVPlot' of a DiStatis object

-- S --

SelectVar Function 'SelectVar' of DiStatis object
SelectVar-class Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
SelectVar-method Function 'SelectVar' of DiStatis object
SelectVar-methods Function 'SelectVar' of DiStatis object
SortList Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
SortList-method Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
SortList<--method Class 'GroupProj' GroupProj S4 class (kimod: k-tables approach to integrate multiple Omics-Data of Multiple dataset) GroupProj to SelectVar object.
Stability.Boot Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Stability.Boot-method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Stability.Boot<--method Class 'Bootstrap': Bootstrap S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
summary-method 'print.Bootstrap' or 'summary.Bootstrap' a Bootstrap object
summary-method 'summary.DiStatis' a DiStatis object
summary-method 'summary.GP' a GroupProj object
summary-method 'summary' a SelectVar object Generic Print/Summary method for SelectVar class output visualization.
summary.Bootstrap 'print.Bootstrap' or 'summary.Bootstrap' a Bootstrap object
summary.DiStatis 'summary.DiStatis' a DiStatis object
summary.GP 'summary.GP' a GroupProj object
summary.SV 'summary' a SelectVar object Generic Print/Summary method for SelectVar class output visualization.

-- T --

Table.Select Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
Table.Select-method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
Table.Select<--method Class 'SelectVar' S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset) SelectVar to DiStatis object.
Trajectories Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Trajectories-method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
Trajectories<--method Class 'DiStatis' DiStatis S4 class (kimod: k-tables approach to integrate multiple Omics-Data Multiple dataset)
TrajPlot Plot a 'TrajPlot' of a DiStatis object
TrajPlot-method Plot a 'TrajPlot' of a DiStatis object

-- W --

winesassesors Description of a set of wines by a group of expert assessors.