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| IMAS-package | 'IMAS': Integrative analysis of Multi-omics data for Alternative Splicing |
| ASvisualization | Visualize the results of the ASdb object. |
| Clinical.data | A data frame for clinical data |
| ClinicAnalysis | Analysis for differential clinical outcomes across PSI values |
| CompGroupAlt | Identify alternatively spliced exons with a differential PSIs between the groups |
| ExonsCluster | Construct representative Exons |
| GroupSam | Group of each sample. |
| IMAS | 'IMAS': Integrative analysis of Multi-omics data for Alternative Splicing |
| MEsQTLFinder | Identify methylation loci that are significantly associated with alternatively spliced exons |
| RatioFromReads | Calculate expression ratio (PSI) from bamfiles |
| samplebamfiles | A data frame for example expression bam files. |
| sampleMedata | Methylation level data |
| sampleMelocus | Genomic locus of methylations |
| samplesnp | Genotype data |
| samplesnplocus | Genomic locus of SNPs |
| SplicingReads | Count a junction and paired-end reads |