A C D E F G I L M N O P R S T U W misc
| GenomicTuples-package | Representation and manipulation of genomic tuples. |
| as.character-method | GTuples objects |
| as.data.frame-method | GTuples objects |
| as.factor-method | GTuples objects |
| c-method | GTuples objects |
| class:GTuples | GTuples objects |
| class:GTuplesList | GTuplesList objects |
| coerce-method | GTuples objects |
| coerce-method | GTuplesList objects |
| countOverlaps | Finding overlapping genomic tuples |
| countOverlaps-method | Finding overlapping genomic tuples |
| coverage-method | Undefined methods |
| disjoin-method | Undefined methods |
| disjointBins-method | Undefined methods |
| distance-method | Finding the nearest genomic tuple/range neighbour |
| distanceToNearest-method | Finding the nearest genomic tuple/range neighbour |
| duplicated-method | Comparing and ordering genomic tuples |
| duplicated.GTuples | Comparing and ordering genomic tuples |
| elementMetadata-method | GTuplesList objects |
| elementMetadata<--method | GTuples objects |
| elementMetadata<--method | GTuplesList objects |
| end-method | GTuples objects |
| end-method | GTuplesList objects |
| end<--method | GTuples objects |
| end<--method | GTuplesList objects |
| findOverlaps | Finding overlapping genomic tuples |
| findOverlaps-method | Finding overlapping genomic tuples |
| findOverlaps-methods | Finding overlapping genomic tuples |
| flank-method | Undefined methods |
| follow-method | Finding the nearest genomic tuple/range neighbour |
| gaps-method | Undefined methods |
| granges-method | GTuples objects |
| gtlist | Squeeze the tuples out of a tuples-based object |
| GTuples | GTuples objects |
| gtuples | Squeeze the tuples out of a tuples-based object |
| GTuples-class | GTuples objects |
| GTuples-comparison | Comparing and ordering genomic tuples |
| GTuplesList | GTuplesList objects |
| GTuplesList-class | GTuplesList objects |
| intersect-method | Undefined methods |
| intra-tuple-methods | Intra-tuple transformations of a GTuples or GTuplesLists object |
| IPD | GTuples objects |
| IPD-method | GTuples objects |
| IPD-method | GTuplesList objects |
| is.unsorted-method | Comparing and ordering genomic tuples |
| isDisjoint-method | Undefined methods |
| length-method | GTuples objects |
| match-method | Comparing and ordering genomic tuples |
| names-method | GTuples objects |
| names<--method | GTuples objects |
| narrow | Undefined methods |
| narrow-method | Undefined methods |
| nearest-method | Finding the nearest genomic tuple/range neighbour |
| nearest-methods | Finding the nearest genomic tuple/range neighbour |
| Ops-method | Undefined methods |
| order-method | Comparing and ordering genomic tuples |
| overlapsAny | Finding overlapping genomic tuples |
| overlapsAny-method | Finding overlapping genomic tuples |
| pcompare-method | Comparing and ordering genomic tuples |
| pgap-method | Undefined methods |
| pintersect-method | Undefined methods |
| precede-method | Finding the nearest genomic tuple/range neighbour |
| promoters-method | Undefined methods |
| psetdiff-method | Undefined methods |
| punion-method | Undefined methods |
| range-method | Undefined methods |
| ranges-method | GTuples objects |
| ranges-method | GTuplesList objects |
| ranges<--method | GTuples objects |
| ranges<--method | GTuplesList objects |
| rank-method | Comparing and ordering genomic tuples |
| reduce-method | Undefined methods |
| relistToClass-method | GTuplesList objects |
| replaceROWS-method | Undefined methods |
| resize-method | Undefined methods |
| restrict-method | Undefined methods |
| score-method | GTuples objects |
| score-method | GTuplesList objects |
| score<--method | GTuples objects |
| score<--method | GTuplesList objects |
| selfmatch-method | Comparing and ordering genomic tuples |
| seqinfo-method | GTuples objects |
| seqinfo-method | GTuplesList objects |
| seqinfo<--method | GTuples objects |
| seqinfo<--method | GTuplesList objects |
| seqnames-method | GTuples objects |
| seqnames-method | GTuplesList objects |
| seqnames<--method | GTuples objects |
| seqnames<--method | GTuplesList objects |
| setdiff-method | Undefined methods |
| shift | Intra-tuple transformations of a GTuples or GTuplesLists object |
| shift-method | Intra-tuple transformations of a GTuples or GTuplesLists object |
| show-method | GTuples objects |
| size | GTuples objects |
| size-method | GTuples objects |
| size-method | GTuplesList objects |
| sort-method | Comparing and ordering genomic tuples |
| sort.GTuples | Comparing and ordering genomic tuples |
| start-method | GTuples objects |
| start-method | GTuplesList objects |
| start<--method | GTuples objects |
| start<--method | GTuplesList objects |
| strand-method | GTuples objects |
| strand-method | GTuplesList objects |
| strand<--method | GTuples objects |
| strand<--method | GTuplesList objects |
| subsetByOverlaps | Finding overlapping genomic tuples |
| subsetByOverlaps-method | Finding overlapping genomic tuples |
| tile-method | Undefined methods |
| trim-method | Intra-tuple transformations of a GTuples or GTuplesLists object |
| tuples | GTuples objects |
| tuples-method | GTuples objects |
| tuples-method | GTuplesList objects |
| tuples-squeezers | Squeeze the tuples out of a tuples-based object |
| tuples<- | GTuples objects |
| tuples<--method | GTuples objects |
| tuples<--method | GTuplesList objects |
| union-method | Undefined methods |
| updateObject-method | GTuples objects |
| updateObject-method | GTuplesList objects |
| width-method | GTuples objects |
| width-method | GTuplesList objects |
| width<--method | GTuples objects |
| width<--method | GTuplesList objects |
| window-method | GTuples objects |
| $-method | GTuples objects |
| $<--method | GTuples objects |
| [-method | GTuples objects |
| [-method | GTuplesList objects |
| [<--method | GTuples objects |
| [<--method | GTuplesList objects |
| [[<--method | GTuplesList objects |