| errRates | Calculating FDR, FNDR, FPR, and FNR for a real microarray data set |
| gsMMD | Gene selection based on a mixture of marginal distributions |
| gsMMD.default | Gene selection based on a mixture of marginal distributions |
| gsMMD2 | Gene selection based on a mixture of marginal distributions |
| gsMMD2.default | Gene selection based on a mixture of marginal distributions |
| obtainResi | Replace expression levels by the residuals of regression analysis to remove the confounding effects. |
| plotHistDensity | Plot of histogram and density estimate of the pooled gene expression levels. |