Visualization for flow cytometry

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Documentation for package ‘flowViz’ version 1.38.0

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flowViz-package Visualization for flow cytometry
addName Add gate names to a flowViz plot.
addName-method Add gate names to a flowViz plot.
addName-methods Add gate names to a flowViz plot.
contour Contour plots for flow data
contour-method Contour plots for flow data
contour-methods Contour plots for flow data
densityplot One-dimensional density/histogram plots for flow data
densityplot-method One-dimensional density/histogram plots for flow data
ecdfplot Method implementing Lattice ECDF plots for flow data
ecdfplot-method Method implementing Lattice ECDF plots for flow data
flowPlot Standard Plots for Flow Cytometry Data
flowPlot-method Standard Plots for Flow Cytometry Data
flowViz Visualization for flow cytometry
flowViz.par.get Query and set session-wide graphical parameter defaults.
flowViz.par.set Query and set session-wide graphical parameter defaults.
glines Drawing filter boundaries
glines-method Drawing filter boundaries
glines-methods Drawing filter boundaries
glpoints Adding points within a gate to a plot
glpoints-method Adding points within a gate to a plot
glpoints-methods Adding points within a gate to a plot
glpolygon Drawing filter regions
glpolygon-method Drawing filter regions
glpolygon-methods Drawing filter regions
gpoints Adding points within a gate to a plot
gpoints-method Adding points within a gate to a plot
gpoints-methods Adding points within a gate to a plot
gpolygon Drawing filter regions
gpolygon-method Drawing filter regions
gpolygon-methods Drawing filter regions
histogram-method One-dimensional density/histogram plots for flow data
lattice-methods Methods implementing Lattice displays for flow data
levelplot-method Methods implementing Lattice displays for flow data
panel.densityplot.flowset.stack One-dimensional density/histogram plots for flow data
panel.ecdfplot.flowset Method implementing Lattice ECDF plots for flow data
panel.splom.flowframe Method implementing Lattice scatter plot matrices for flow data.
panel.xyplot.flowframe Methods implementing Lattice xyplots for flow data.
panel.xyplot.flowframe.time Methods implementing Lattice xyplots for flow data.
panel.xyplot.flowset Methods implementing Lattice xyplots for flow data.
parallel-method Methods implementing Lattice displays for flow data
plot Very basic plotting of flowFrames
plot-method Very basic plotting of flowFrames
prepanel.densityplot.flowset.stack One-dimensional density/histogram plots for flow data
prepanel.ecdfplot.flowset Method implementing Lattice ECDF plots for flow data
prepanel.xyplot.flowframe Methods implementing Lattice xyplots for flow data.
prepanel.xyplot.flowframe.time Methods implementing Lattice xyplots for flow data.
prepanel.xyplot.flowset Methods implementing Lattice xyplots for flow data.
qqmath-method Methods implementing Lattice displays for flow data
splom Method implementing Lattice scatter plot matrices for flow data.
splom-method Method implementing Lattice scatter plot matrices for flow data.
timeLinePlot Plot channel values against time
timelineplot Plot channel values against time
timeLinePlot-method Plot channel values against time
xyplot Methods implementing Lattice xyplots for flow data.
xyplot-method Methods implementing Lattice xyplots for flow data.