Visualizations of expressionSet Bioconductor object

Documentation for package ‘esetVis’ version 1.4.0

esetLda	plot a biplot of a linear discriminant analysis of an eSet object
esetPlotWrapper	wrapper for biplot of features/samples contained in a eSet object
esetSpectralMap	plot a spectral map biplot of an eSet.
esetTsne	plot a t-SNE of an eSet object
getCoordGeneSets	extract coordinates gene sets
getGeneSetsForPlot	get gene sets for plot of eSet object.
getMethodsInputObjectEsetVis	wrapper to extract useful functions, depending if the object is an ExpressionSet or a SummarizedExperiment.
plotTopElements	create 'geom_text' object with top genes/sample/pathways