| cisPath | Visualization of the shortest paths of functional interaction between proteins |
| cisPath-method | Visualization of the shortest paths of functional interaction between proteins |
| combinePPI | Combine PPI information from databases |
| combinePPI-method | Combine PPI information from databases |
| easyEditor | Easy editor for network graphs |
| easyEditor-method | Easy editor for network graphs |
| formatiRefIndex | Format PPI files downloaded from the iRefIndex database |
| formatiRefIndex-method | Format PPI files downloaded from the iRefIndex database |
| formatPINAPPI | Format PPI files downloaded from the PINA database (MITAB Format) |
| formatPINAPPI-method | Format PPI files downloaded from the PINA database (MITAB Format) |
| formatSIFfile | Format PPI file downloaded from the PINA2 database (SIF Format) |
| formatSIFfile-method | Format PPI file downloaded from the PINA2 database (SIF Format) |
| formatSTRINGPPI | Format PPI file downloaded from the STRING database |
| formatSTRINGPPI-method | Format PPI file downloaded from the STRING database |
| getMappingFile | Generate the identifier mapping file |
| getMappingFile-method | Generate the identifier mapping file |
| networkView | Visualization of the interactions between input proteins |
| networkView-method | Visualization of the interactions between input proteins |