| BEAT-package | BEAT - BS-Seq Epimutation Analysis Toolkit |
| BEAT | BEAT - BS-Seq Epimutation Analysis Toolkit |
| epimutation_calls | Returns epimutation rates and sites. |
| generate_results | Computes model methylation states for genomic region counts of a list of samples. |
| makeParams | Creates a parameter object of arguments to be used with other BEAT functions. |
| positions | Sample dataset of CpG positions for a single cell BS-seq sample |
| positions.reference | Sample dataset of CpG positions for a reference BS-Seq sample |
| positions_to_regions | Converts methylation counts for single genomic positions to counts for genomic regions |