| bcSeq-package | Fast Sequence Alignment for High-throughput shRNA and CRISPR Screens |
| bcSeq_edit | Function to perform reads to barcode alignment tolerating edit type error distance. |
| bcSeq_hamming | Function to perform reads to barcode alignment tolerating hamming type error distance |
| trimRead | Tool function to trim adaptor for read sequences. |
| uniqueBar | Tool function to obtain unique barcode sequences from a library . |