| AnnDbPkgSeed | Create an SQLite-based annotation package |
| AnnDbPkgSeed-class | Create an SQLite-based annotation package |
| available.chipdbschemas | available.db0pkgs |
| available.db0pkgs | available.db0pkgs |
| available.dbschemas | available.db0pkgs |
| class:AnnDbPkgSeed | Create an SQLite-based annotation package |
| generateSeqnames.db | Generates the seqnames.db package and database |
| getProbeDataAffy | Read a data file describing the probe sequences on an Affymetrix genechip |
| getProbeData_1lq | Read a 1lq file for an Affymetrix genechip |
| loadAnnDbPkgIndex | Create an SQLite-based annotation package |
| makeAnnDbPkg | Create an SQLite-based annotation package |
| makeAnnDbPkg-method | Create an SQLite-based annotation package |
| makeChipPackage | Making a chip package from annotations available from data.frame of probes mapped to gene IDs and an existing org package. |
| makeDBPackage | Creates a sqlite database, and then makes an annotation package with it |
| makeInpDb | Builds an individual DB from online files at inparanoid that is in turn meant for generating Inparanoid 8 based objects. |
| makeOrgPackage | Making an organism package from annotations available from a set of named data.frames. |
| makeOrgPackageFromNCBI | Make an organism package from annotations available from NCBI. |
| makeProbePackage | Make a package with probe sequence related data for microarrays |
| popBOVINECHIPDB | Populates an SQLite DB with and produces a schema definition |
| popBOVINEDB | Populates an SQLite DB with and produces a schema definition |
| popCANINECHIPDB | Populates an SQLite DB with and produces a schema definition |
| popCANINEDB | Populates an SQLite DB with and produces a schema definition |
| popCHICKENCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popCHICKENDB | Populates an SQLite DB with and produces a schema definition |
| popECOLICHIPDB | Populates an SQLite DB with and produces a schema definition |
| popECOLIDB | Populates an SQLite DB with and produces a schema definition |
| popFLYCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popFLYDB | Populates an SQLite DB with and produces a schema definition |
| popHUMANCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popHUMANDB | Populates an SQLite DB with and produces a schema definition |
| popMALARIADB | Populates an SQLite DB with and produces a schema definition |
| popMOUSECHIPDB | Populates an SQLite DB with and produces a schema definition |
| popMOUSEDB | Populates an SQLite DB with and produces a schema definition |
| popPIGCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popPIGDB | Populates an SQLite DB with and produces a schema definition |
| popRATCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popRATDB | Populates an SQLite DB with and produces a schema definition |
| populateDB | Populates an SQLite DB with and produces a schema definition |
| popWORMCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popWORMDB | Populates an SQLite DB with and produces a schema definition |
| popYEASTDB | Populates an SQLite DB with and produces a schema definition |
| popYEASTNCBIDB | Populates an SQLite DB with and produces a schema definition |
| popZEBRAFISHCHIPDB | Populates an SQLite DB with and produces a schema definition |
| popZEBRAFISHDB | Populates an SQLite DB with and produces a schema definition |
| wrapBaseDBPackages | Wrap up all the Base Databases into Packages for distribution |