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| .GRangesFilter | Filters for annotation objects |
| AnnotationFilter | Filters for annotation objects |
| AnnotationFilter-class | Filters for annotation objects |
| AnnotationFilterList | Combining annotation filters |
| AnnotationFilterList-class | Combining annotation filters |
| CdsEndFilter | Filters for annotation objects |
| CdsEndFilter-class | Filters for annotation objects |
| CdsStartFilter | Filters for annotation objects |
| CdsStartFilter-class | Filters for annotation objects |
| CharacterFilter-class | Filters for annotation objects |
| condition | Filters for annotation objects |
| condition-method | Filters for annotation objects |
| EntrezFilter | Filters for annotation objects |
| EntrezFilter-class | Filters for annotation objects |
| ExonEndFilter | Filters for annotation objects |
| ExonEndFilter-class | Filters for annotation objects |
| ExonIdFilter | Filters for annotation objects |
| ExonIdFilter-class | Filters for annotation objects |
| ExonNameFilter | Filters for annotation objects |
| ExonNameFilter-class | Filters for annotation objects |
| ExonRankFilter | Filters for annotation objects |
| ExonRankFilter-class | Filters for annotation objects |
| ExonStartFilter | Filters for annotation objects |
| ExonStartFilter-class | Filters for annotation objects |
| feature | Filters for annotation objects |
| field | Filters for annotation objects |
| field-method | Filters for annotation objects |
| GeneBiotypeFilter | Filters for annotation objects |
| GeneBiotypeFilter-class | Filters for annotation objects |
| GeneEndFilter | Filters for annotation objects |
| GeneEndFilter-class | Filters for annotation objects |
| GeneIdFilter | Filters for annotation objects |
| GeneIdFilter-class | Filters for annotation objects |
| GenenameFilter | Filters for annotation objects |
| GenenameFilter-class | Filters for annotation objects |
| GeneStartFilter | Filters for annotation objects |
| GeneStartFilter-class | Filters for annotation objects |
| GRangesFilter | Filters for annotation objects |
| GRangesFilter-class | Filters for annotation objects |
| IntegerFilter-class | Filters for annotation objects |
| ProteinIdFilter | Filters for annotation objects |
| ProteinIdFilter-class | Filters for annotation objects |
| SeqNameFilter | Filters for annotation objects |
| SeqNameFilter-class | Filters for annotation objects |
| SeqStrandFilter | Filters for annotation objects |
| SeqStrandFilter-class | Filters for annotation objects |
| show-method | Filters for annotation objects |
| show-method | Combining annotation filters |
| supportedFilters | Filters for annotation objects |
| supportedFilters-method | Filters for annotation objects |
| SymbolFilter | Filters for annotation objects |
| SymbolFilter-class | Filters for annotation objects |
| TxBiotypeFilter | Filters for annotation objects |
| TxBiotypeFilter-class | Filters for annotation objects |
| TxEndFilter | Filters for annotation objects |
| TxEndFilter-class | Filters for annotation objects |
| TxIdFilter | Filters for annotation objects |
| TxIdFilter-class | Filters for annotation objects |
| TxNameFilter | Filters for annotation objects |
| TxNameFilter-class | Filters for annotation objects |
| TxStartFilter | Filters for annotation objects |
| TxStartFilter-class | Filters for annotation objects |
| UniprotFilter | Filters for annotation objects |
| UniprotFilter-class | Filters for annotation objects |
| value | Filters for annotation objects |
| value-method | Filters for annotation objects |
| value-method | Combining annotation filters |