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| acde-package | Artificial Components Detection of Differentially Expressed Genes |
| ac | Artificial Components for Gene Expression Data |
| ac2 | Artificial Components for Gene Expression Data |
| acde | Artificial Components Detection of Differentially Expressed Genes |
| bcaFDR | BCa Confidence Upper Bound for the FDR |
| fdr | False Discovery Rate Computation |
| phytophthora | Gene Expression Data for Tomato Plants Inoculated with _Phytophthora infestans_ |
| plot.STP | Plot Method for Single Time Point Analysis |
| plot.TC | Plot Method for Time Course Analysis |
| print.STP | Print Method for Single Time Point Analysis |
| print.TC | Print Method for Time Course Analysis |
| qval | Q-Values Computation |
| stp | Single Time Point Analysis for Detecting Differentially Expressed Genes |
| summary.TC | Print Method for Time Course Analysis |
| tc | Time Course Analysis for Detecting Differentially Expressed Genes |