site-packages/vartracker-2.1.1.dist-info/INSTALLER
site-packages/vartracker-2.1.1.dist-info/METADATA
site-packages/vartracker-2.1.1.dist-info/RECORD
site-packages/vartracker-2.1.1.dist-info/REQUESTED
site-packages/vartracker-2.1.1.dist-info/WHEEL
site-packages/vartracker-2.1.1.dist-info/direct_url.json
site-packages/vartracker-2.1.1.dist-info/entry_points.txt
site-packages/vartracker-2.1.1.dist-info/licenses/LICENSE
site-packages/vartracker/Snakefile
site-packages/vartracker/__init__.py
site-packages/vartracker/_version.py
site-packages/vartracker/amino_acids.py
site-packages/vartracker/analysis.py
site-packages/vartracker/analysis_launcher.py
site-packages/vartracker/annotation_processing.py
site-packages/vartracker/constants.py
site-packages/vartracker/core.py
site-packages/vartracker/data/NC_045512.fasta
site-packages/vartracker/data/NC_045512.fasta.amb
site-packages/vartracker/data/NC_045512.fasta.ann
site-packages/vartracker/data/NC_045512.fasta.bwt
site-packages/vartracker/data/NC_045512.fasta.fai
site-packages/vartracker/data/NC_045512.fasta.pac
site-packages/vartracker/data/NC_045512.fasta.sa
site-packages/vartracker/data/NC_045512.gff3
site-packages/vartracker/data/__init__.py
site-packages/vartracker/data/midnightv2.bed
site-packages/vartracker/data/parse_pokay.py
site-packages/vartracker/generate.py
site-packages/vartracker/main.py
site-packages/vartracker/provenance.py
site-packages/vartracker/reference_prepare.py
site-packages/vartracker/schemas.py
site-packages/vartracker/test_data/bams/test_psg_0_aligned.indelqual.bam
site-packages/vartracker/test_data/bams/test_psg_0_aligned.indelqual.bam.bai
site-packages/vartracker/test_data/bams/test_psg_1_aligned.indelqual.bam
site-packages/vartracker/test_data/bams/test_psg_1_aligned.indelqual.bam.bai
site-packages/vartracker/test_data/bams/test_psg_2_aligned.indelqual.bam
site-packages/vartracker/test_data/bams/test_psg_2_aligned.indelqual.bam.bai
site-packages/vartracker/test_data/bams/test_psg_3_aligned.indelqual.bam
site-packages/vartracker/test_data/bams/test_psg_3_aligned.indelqual.bam.bai
site-packages/vartracker/test_data/bams/test_psg_4_aligned.indelqual.bam
site-packages/vartracker/test_data/bams/test_psg_4_aligned.indelqual.bam.bai
site-packages/vartracker/test_data/bams/test_psg_5_aligned.indelqual.bam
site-packages/vartracker/test_data/bams/test_psg_5_aligned.indelqual.bam.bai
site-packages/vartracker/test_data/coverage/test_psg_0_depth.txt
site-packages/vartracker/test_data/coverage/test_psg_1_depth.txt
site-packages/vartracker/test_data/coverage/test_psg_2_depth.txt
site-packages/vartracker/test_data/coverage/test_psg_3_depth.txt
site-packages/vartracker/test_data/coverage/test_psg_4_depth.txt
site-packages/vartracker/test_data/coverage/test_psg_5_depth.txt
site-packages/vartracker/test_data/inputs/test_input_bam.csv
site-packages/vartracker/test_data/inputs/test_input_e2e.csv
site-packages/vartracker/test_data/inputs/test_input_vcf.csv
site-packages/vartracker/test_data/mock_literature/mock_literature.csv
site-packages/vartracker/test_data/precomputed/test_results.csv
site-packages/vartracker/test_data/reads/test_psg_0_R1.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_0_R2.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_1_R1.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_1_R2.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_2_R1.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_2_R2.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_3_R1.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_3_R2.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_4_R1.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_4_R2.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_5_R1.fastq.gz
site-packages/vartracker/test_data/reads/test_psg_5_R2.fastq.gz
site-packages/vartracker/test_data/vcfs/test_psg_0.vcf.gz
site-packages/vartracker/test_data/vcfs/test_psg_0.vcf.gz.csi
site-packages/vartracker/test_data/vcfs/test_psg_1.vcf.gz
site-packages/vartracker/test_data/vcfs/test_psg_1.vcf.gz.csi
site-packages/vartracker/test_data/vcfs/test_psg_2.vcf.gz
site-packages/vartracker/test_data/vcfs/test_psg_2.vcf.gz.csi
site-packages/vartracker/test_data/vcfs/test_psg_3.vcf.gz
site-packages/vartracker/test_data/vcfs/test_psg_3.vcf.gz.csi
site-packages/vartracker/test_data/vcfs/test_psg_4.vcf.gz
site-packages/vartracker/test_data/vcfs/test_psg_4.vcf.gz.csi
site-packages/vartracker/test_data/vcfs/test_psg_5.vcf.gz
site-packages/vartracker/test_data/vcfs/test_psg_5.vcf.gz.csi
site-packages/vartracker/vcf_processing.py
