RGCCA-package |
Regularized (or Sparse) Generalized Canonical Correlation Analysis (R/SGCCA) for multi-block data analysis |
bootstrap |
Bootstrap confidence intervals and p-values |
ECSI |
European Customer Satisfaction Index |
get_bootstrap |
Extract statistics from a fitted bootstrap object |
load_blocks |
Create a list of matrix from loading files corresponding to blocks |
load_response |
Create a matrix corresponding to the response |
plot.bootstrap |
Plot a fitted bootstrap object |
plot.cval |
Plot cross-validation |
plot.permutation |
Plot fitted rgcca permutation object |
plot.predict |
plot.predict |
plot.rgcca |
Plot for RGCCA |
plot2D |
Plot RGCCA components in a bi-dimensional space |
plot_ave |
Histogram of Average Variance Explained |
plot_bootstrap_1D |
Plot a fitted bootstrap object in 1D |
plot_bootstrap_2D |
Plot a bootstrap in 2D |
plot_histogram |
Histogram settings |
plot_ind |
Plot the two components of a RGCCA |
plot_network |
Plot the connection between blocks |
plot_network2 |
Plot the connection between blocks (dynamic plot) |
plot_permut_2D |
Plot permutation in 2D |
plot_var_1D |
Barplot of a fingerprint |
plot_var_2D |
Plot of variables space |
print.bootstrap |
Print bootstrap |
print.cval |
print.cval |
print.permutation |
Print a fitted rgcca_permutation object |
print.rgcca |
Print the call of rgcca results |
print_comp |
Print the variance of a component |
RGCCA |
Regularized (or Sparse) Generalized Canonical Correlation Analysis (R/SGCCA) for multi-block data analysis |
rgcca |
Regularized (or Sparse) Generalized Canonical Correlation Analysis (S/RGCCA) |
rgccad |
Regularized Generalized Canonical Correlation Analysis (RGCCA) |
rgccak |
Internal function for computing the RGCCA parameters (RGCCA block components, outer weight vectors, etc.). |
rgcca_cv |
Tune RGCCA parameters in 'supervised' mode with cross-validation |
rgcca_cv_k |
Cross-validation |
rgcca_permutation |
Tune the S/RGCCA hyper-parameters by permutation |
rgcca_predict |
Predict RGCCA |
rgcca_stability |
Stability selection for SGCCA |
Russett |
Russett data |
save_plot |
Save a ggplot object |
select_analysis |
Define the parameters associated with each multi-block component method of the literature. |
set_connection |
Create either a superblock design matrix (if superblock = TRUE), or a supervised design matrix (if response != NULL) or a fully connected design matrix (if response == NULL and superblock == FALSE) |
sgcca |
Variable Selection For Generalized Canonical Correlation Analysis (SGCCA) |
sgccak |
Internal function for computing the SGCCA parameters (SGCCA block components, outer weight vectors etc.) |