Coercion methods for biological data


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Documentation for package ‘transformer’ version 0.2.4

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anti_join Join operations supporting S4 class objects
anti_join-method Join operations supporting S4 class objects
as.data.frame Coerce to data frame
as.data.frame-method Coerce to data frame
as.data.table Coerce to data table
as.data.table.DataFrame Coerce to data table
as.data.table.GenomicRanges Coerce to data table
as.data.table.IPosRanges Coerce to data table
as.SummarizedExperiment Coerce to summarized experiment
as.SummarizedExperiment.RangedSummarizedExperiment Coerce to summarized experiment
as.SummarizedExperiment.SummarizedExperiment Coerce to summarized experiment
as_tibble Coerce to tibble
as_tibble.DataFrame Coerce to tibble
as_tibble.GenomicRanges Coerce to tibble
as_tibble.IPosRanges Coerce to tibble
atomize Atomize
atomize-method Atomize
band_instruments Band membership
band_members Band membership
coerce-data.frame Coerce to data frame
coerce-data.table Coerce to data table
coerce-DataFrame Coerce to data frame
coerce-method Coerce to data frame
coerce-method Coerce to data frame
coerce-method Coerce to data table
coerce-method Coerce to tibble
coerce-SummarizedExperiment Coerce to summarized experiment
coerce-tbl_df Coerce to tibble
coerceS4ToList Coerce any S4 object to a list
decode Decode column data that uses run-length encoding
decode-method Decode column data that uses run-length encoding
droplevels Drop unused levels from factors
droplevels-method Drop unused levels from factors
encode Encode using run-length encoding
encode-method Encode using run-length encoding
factorize Factorize
factorize-method Factorize
flatFiles Coerce any S4 object to a list
flatFiles-method Coerce any S4 object to a list
full_join Join operations supporting S4 class objects
full_join-method Join operations supporting S4 class objects
inner_join Join operations supporting S4 class objects
inner_join-method Join operations supporting S4 class objects
join Join operations supporting S4 class objects
left_join Join operations supporting S4 class objects
left_join-method Join operations supporting S4 class objects
matchRowNameColumn Match row name column
mutate Mutate multiple columns
mutate_all Mutate multiple columns
mutate_all-method Mutate multiple columns
mutate_at Mutate multiple columns
mutate_at-method Mutate multiple columns
mutate_if Mutate multiple columns
mutate_if-method Mutate multiple columns
right_join Join operations supporting S4 class objects
right_join-method Join operations supporting S4 class objects
select Select and rename a selection of variables
select_all Select and rename a selection of variables
select_all-method Select and rename a selection of variables
select_at Select and rename a selection of variables
select_at-method Select and rename a selection of variables
select_if Select and rename a selection of variables
select_if-method Select and rename a selection of variables
semi_join Join operations supporting S4 class objects
semi_join-method Join operations supporting S4 class objects
transmute_at Mutate multiple columns
transmute_at-method Mutate multiple columns
transmute_if Mutate multiple columns
transmute_if-method Mutate multiple columns